miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea sitchensis



ABOUT THIS RECORD

ID: MNEST001988
species: Picea sitchensis
miRNA family: MIR3709
source: miRNEST

Taxonomy by NCBI:
Picea sitchensis Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTAAATGCCTTAAATTCCCGA

miRNA*
GGGATTTAAAGCATTTGAAGT

mismatches: 1
bulges: 1

View larger
pre-miRNA
GACTGGCTTAAATCCAAGAACTTTAAATGCCTTAAATTCCCGATAAATTCAGGCGATGACCGAATATATTTCGGGATTTAAAGCATTTGAAGTTCTGGAT
TTATCCCAAAC


dot-bracket secondary structure
...(((..((((((((.(((((((((((((.((((((.(((((((.((((.((......)))))).))..))))))))))).))))))))))))))))))
)))..)))...



SIMILARITIES
miRBase pab-MIR3709b: 1e-49

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: pab-MIR3709b from miRBase (MNEST039411)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;